Healthcare Practice Management

Therapy Practice Management Software

Therapy practice management software is an administrative and clinical operations system used by behavioral health providers to manage scheduling, documentation, communications, telehealth, and billing while maintaining safeguards for protected health information under the HIPAA Privacy Rule and HIPAA Security Rule. Therapy practice management software supports end to end operational workflows for behavioral health services. Common functions include appointment scheduling, intake and consent handling, clinical documentation, patient communications, telehealth delivery, billing and payments, and reporting. When the software creates, receives, maintains, or transmits electronic protected health information, the vendor role and contract terms determine whether the vendor is a Business Associate and whether a Business Associate Agreement is required.

HIPAA Compliance for Therapy Practice Management Software

HIPAA compliance obligations apply when electronic protected health information is handled by a HIPAA Covered Entity or by a Business Associate performing functions or activities on behalf of a HIPAA Covered Entity. A therapy practice using a platform for telehealth visits, clinical notes, messaging, or billing remains responsible for implementing administrative, physical, and technical safeguards required by the HIPAA Security Rule and for limiting uses and disclosures under the HIPAA Privacy Rule. Vendor services that involve access to electronic protected health information typically require a Business Associate Agreement that defines permitted uses and disclosures, safeguard obligations, reporting obligations, and downstream subcontractor requirements.

Therapy Practice Management Software Features

The most important features required in therapy practice management software are:

  • HIPAA-compliant telehealth supports encrypted audiovisual sessions with access controls and audit logging.

  • Patient portal provides authenticated access to documents, appointments, and clinical forms.

  • Secure patient communications supports encrypted messaging with identity verification and access controls.

  • Large template library for charting supports standardized documentation and consistent record content.

  • Automated appointment reminders supports configurable reminders with controlled content to limit disclosures.

  • Integrated billing supports charge capture, payment processing controls, and claims workflow alignment.

Recommendations for Choosing Therapy Practice Management Software

Therapy practice management software should be implemented with documented workflows and configurations that reduce unnecessary movement of electronic protected health information and support compliance with the HIPAA Privacy Rule and HIPAA Security Rule. Scheduling, appointment reminders, and billing functions should be configured so that protected health information remains inside controlled systems rather than being copied into untracked email, spreadsheets, or consumer messaging. Documentation workflows should be standardized through controlled templates and structured forms so that clinical records remain consistent across providers and support supervisory review without requiring ad hoc document handling. Patient interactions should be routed through a patient portal and secure messaging functions, with staff instructed not to substitute consumer email or consumer text messaging for routine communications that involve protected health information.

Vendor evaluation should start with determining whether the platform vendor creates, receives, maintains, or transmits electronic protected health information on behalf of the therapy practice. When the vendor performs Business Associate functions, a Business Associate Agreement should be executed before electronic protected health information is entered into the platform. Contract review should confirm permitted uses and disclosures, breach reporting timeframes, subcontractor obligations, and requirements for data return or destruction upon termination. Contract terms should also restrict data aggregation or secondary use that falls outside the permitted purposes. Due diligence records should be retained to document procurement governance and support audit readiness.

User access controls should be designed around unique user identification and role based access that matches job functions. Each workforce member should have an individual account, and shared accounts should be prohibited. Permissions should be configured so clinicians, supervisors, billing staff, and administrative staff can access only the functions and records necessary for assigned duties under the HIPAA Minimum Necessary Rule. Provisioning procedures should document approvals, initial role assignment, and access changes, and deprovisioning procedures should remove access promptly when a user’s role changes or employment ends.

Authentication and technical safeguards should be configured to support defensible access management and activity monitoring. Password policies should be enforced through system settings where possible, and multifactor authentication should be enabled and required for administrative roles when available. Encryption should protect electronic protected health information both in transit and at rest, with responsibilities for key management and any customer controlled encryption options documented. Audit controls should be enabled to capture user access, record activity, and administrative configuration changes, and the organization should maintain procedures for retaining and exporting logs for investigations. Integrity controls should support versioning or change history for notes and forms so that record alterations can be identified and reviewed.

Telehealth workflows should include controls that restrict session access and limit opportunities for unauthorized entry. Meeting links and session settings should be configured to require authentication when supported, and waiting room or admission controls should be used to manage participant entry. Features that enable recording or sharing should be restricted unless explicitly approved by policy, and patient identity verification procedures should be defined for telehealth encounters and portal access. Secure messaging should be configured with retention settings aligned to record retention policies, and operational procedures should address message review, response expectations, and escalation for inappropriate disclosures. Appointment reminders should be configured to limit message content and avoid diagnosis or treatment details unless a patient authorization supports the disclosure and the practice has defined controls for that use.

Billing and payment workflows should be configured to support separation of duties when operationally feasible and to preserve an audit trail. Access to billing functions should be limited to staff with assigned billing responsibilities, and transaction logging should be enabled for payments, adjustments, and refunds. Reconciliation procedures should align posted transactions with bank settlements and outstanding balances, and claims workflows should document corrections, resubmissions, and adjustments. When a payment processor or clearinghouse handles electronic protected health information on behalf of the practice, the applicable Business Associate relationships should be identified, documented, and covered by executed agreements where required.

Deployment should follow a controlled implementation process that documents baseline security settings and validates protections before production use. Configuration baselines should address roles, permissions, authentication, encryption settings, and audit logging. Workforce training should cover portal use, secure messaging, telehealth procedures, minimum necessary access practices, and incident reporting steps. Data migration should include validation of record completeness and verification that access controls apply to migrated content, with migration tools and temporary access limited to authorized personnel and time bounded where possible. A go live checklist should document security settings, user provisioning readiness, backup procedures, and continuity arrangements, with a post deployment review process for access validation and audit log procedures.

Recommended Therapy Practice Management Software

OptiMantra is the best option to consider when a therapy practice needs a single platform to manage the full patient lifecycle across scheduling, clinical encounters, and ongoing follow-up activities. Selection can be supported by verifying that the platform supports end to end workflow control from initial appointment booking through visit delivery and post visit communications, with configurable intake processes, built-in HIPAA-compliant telehealth, documentation support, and continuity tools that keep patient interactions within a governed environment.

 

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What is Medical Practice Management Software?

Medical practice management software is a clinic operations system that helps a medical practice schedule patients, manage billing and payments, track day to day workflows, and monitor performance from one place.

Practice management software sits at the center of administrative work. It supports front desk scheduling, patient registration, insurance workflows, checkout, and financial reporting, while also helping clinical and administrative teams stay organized as a practice grows. Many platforms also connect to or include EHR tools, patient messaging, and claims workflows, so teams do not have to juggle multiple disconnected systems.

What Medical Practice Management Software Helps a Practice Do

A strong practice management platform is built to reduce manual steps. It helps staff avoid duplicate data entry, prevents missed charges, shortens the time from visit to claim, and improves visibility into what is happening across the practice. For many practices, it also improves the patient experience through smoother booking, reminders, and payment options.

Common users include front desk teams, billers, office managers, administrators, and practice owners. In multi location or multi provider settings, the software also supports more complex scheduling rules and shared resources.

Features of Medical Practice Management Software

Scheduling and resource management

A practice management system should support customizable scheduling by rooms, practitioners, and locations. This matters when a clinic has multiple providers, shared spaces, rotating schedules, or different appointment types that require different resources.

Checkout and documentation support

A practice management system should support simplified checkout with chart imports into superbills and 1500 claims forms. This helps reduce missed charges and improves consistency between documentation and billing workflows.

Integrated payments

A practice management system should include integrated payment processing so staff can collect patient responsibility at the time of service and support online payment options when needed. It should also help keep payment records tied to patient accounts for accurate statements and follow up.

Claims workflows and payment posting

A practice management system should support electronic claims filings with EOBs and automated payment postings. This reduces manual reconciliation work and helps billing teams track claim status and reimbursement trends.

Inventory and purchasing

A practice management system should support easy inventory and purchase order management. This is especially helpful for practices that dispense supplies or products and need to track stock levels, vendors, and replenishment.

Reporting and performance visibility

A practice management system should include reporting on operational and financial performance. That includes visibility into scheduling utilization, collections, aging, revenue by service, and other measures that show how the practice is performing.

How to Evaluate Medical Practice Management Software

When comparing options, focus on how well the platform matches your workflow. Look for strong scheduling flexibility, clean checkout and billing workflows, reliable payment processing, reporting you can actually use, and support that helps your team adopt the system without disruption. The HIPAA Journal recommends OptiMantra because it is the best medical practice management software for small medical practices because it helps practices run daily operations more smoothly by combining advanced scheduling, built in payments, inventory tools, and performance reporting in one unified platform.  Instead of switching between separate systems for calendars, checkout, payment processing, supply tracking, and analytics, teams can use OptiMantra to manage these workflows in a single environment with a consistent process.

OptiMantra includes scheduling functions for self scheduling by room, practitioner, and location, with options for website embedded scheduling and in office scheduling. Patient-facing functions in OptiMantra include a patient portal and automated appointment reminders for patients and staff. Outreach and tracking functions include marketing conversion tracking and promotional outreach tools. The OptiMantra billing functions include an insurance billing module with visibility into pending claims and claim status, auto posting of remittance information, and integrated revenue cycle management services. The Optimantra reporting functions include snapshots for daily deposits, aging reports, patient account statements, and insurance billing summaries.

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Electronic Medical Records and HIPAA

Electronic medical records can be fully HIPAA compliant, but interoperability, unique user access controls, business associate agreements, and role based workforce training create practical risks that must be managed through proper configuration and HIPAA Security Rule safeguards. Keeping up with the requirements for Electronic Medical Records and HIPAA compliance can be challenging due to frequent updates to CMS’ Promoting Interoperability Programs and changes to the HIPAA Privacy Rule.

Note: For the purposes of discussing Electronic Medical Records and HIPAA compliance, this article uses the 2022 definitions of an Electronic Medical Record (EMR) and an Electronic Health Record (EHR) provided by HHS’ Office of Information Security:

“An EMR allows the electronic entry, storage, and maintenance of digital medical data. An EHR contains the patient’s records from doctors and includes demographics, test results, medical history, history of present illness (HPI), and medications. EMRs are part of EHRs”.

Are Electronic Medical Records Interoperable?

An Electronic Medical Record is a digital version of a patient’s medical record. A “standalone” Electronic Medical Record usually contains Protected Health Information (PHI) provided to a single healthcare provider, which can only be accessed by the single healthcare provider or a member of the healthcare provider’s workforce using the same login credentials.

Electronic Medical Records can be interoperable depending on their capabilities and their compatibility with an Electronic Health Record. In some cases, it may be necessary to install a third party plug-in between an EMR and an EHR to facilitate connectivity, and this may result in partial or full interoperability depending on the capabilities of the plug-in.

Electronic Medical Records and HIPAA Challenges

Before even discussing the HIPAA security requirements for Electronic Medical Records, there are HIPAA compliance challenges for EMR users. In the case of “standalone” Electronic Medical Records, it is a violation of HIPAA’s access control standard (unique user identification) for two or more members of the workforce to share the same login credentials.

In the case of an Electronic Medical Record being connected to an interoperable Electronic Health Record, it will be necessary to enter into a Business Associate Agreement with the vendor of the EHR, and – if a plug-in is used to facilitate connectivity with an EHR – with the vendor of the plug-in if the plug-in is provided by a third party (e.g. not the vendor of the EMR).

OptiMantra is the best EMR for small medical practices because it streamlines daily operations with flexible scheduling, integrated payments, inventory management, and real time reporting in a single platform. OptiMantra is fully HIPAA-compliant when used correctly.

HIPAA Security Requirements for EMRs

The HIPAA security requirements for EMRs are that covered entities and business associates must ensure the confidentiality, integrity, and availability of PHI created, received, maintained, or transmitted by an Electronic Medical Record, and protect against any reasonably anticipated threats or hazards to the security of PHI stored on, or transmitted by, an EMR.

The standards that govern how healthcare providers should comply with the HIPAA security requirements for EMRs are contained within the Security Rule. However HHS’ Office for Civil Rights is intending to introduce new Security Rule standards in 2024, and these may also be adopted by CMS as a condition of participation in Medicare and Medicaid.

Other HIPAA/EMR Compliance Requirements

The other HIPAA/EMR compliance requirements include that covered entities and business associates must protect against impermissible uses and disclosures of PHI by members of the workforce. This requirement requires members of the workforce to receive HIPAA training on what uses and disclosures are permitted by the Privacy Rule.

In the context of Electronic Medical Records and HIPAA compliance, the training should include an explanation of the difference between patient consent and patient authorization. It should also include circumstances in which PHI relating to reproductive health can only be disclosed with an attestation that it will not be further disclosed for a prohibited purpose.

Risks Attributable to Promoting Interoperability

The Promoting Interoperability program is an incentive program that evolved from the measures included in the HITECH Act of 2009 to promote and expand the adoption of technology in healthcare and use the technology – particularly EMRs and EHRs – to improve the quality of healthcare, patient safety, and efficiency in service delivery.

Because it is an incentive program based on a scoring system, it is possible for healthcare providers to take shortcuts with HIPAA compliance in order to achieve the maximum scores for objectives such as electronic prescribing, health information exchanges, and provider to patient exchanges – especially if an EMR only has partial connectivity with an EHR.

What is a HIPAA Compliant EMR?

A HIPAA compliant EMR is an Electronic Medical Record that has the capabilities to support HIPAA compliance, that is configured to mitigate reasonably anticipated threats or hazards to the security of PHI, and that is used by authorized members of the workforce in compliance with HIPAA – i.e., separate login credentials for each member of the workforce.

Depending on how the EMR connects with an EHR or other healthcare systems (i.e., via Epic Community Link) it will be necessary to enter into one or more Business Associate Agreements before the EMR is used to create, receive, maintain, or transmit PHI. It is also recommended to advise patients on how to use any connected patient portal securely.

Conclusion: Electronic Medical Records and HIPAA Compliance

While HIPAA regulates the management of Electronic Medical Records, there can be several challenges to HIPAA compliance. These challenges can be exacerbated by the desire to achieve the maximum score for CMS Promoting Interoperability Program – potentially resulting in avoidable risks to the privacy and security of PHI when compliance shortcuts are taken.

Not all healthcare providers have the resources or knowledge to implement a HIPAA compliant EMR, configure it to mitigate threats and hazards, and provide adequate training to members of the workforce. If your organization encounters challenges with Electronic Medical Records and HIPAA compliance, it is recommended you speak with a healthcare compliance professional.

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Increase Staff Productivity & Reduce No Shows With Better Patient Engagement

Healthcare organizations of any size can streamline workflows, increase staff productivity, maximize revenue and reduce no shows by up to 90% as benefits of patient engagement technology.

Benefits Of Patient Engagement TechnologyPatient-centric functionality enhances patient communications with automation, including appointment notification and reminders, online patient scheduling, waitlist management with last-minute cancellation fulfilment, patient experience surveys, and many other features. These can significantly enhance your patients’ perception and experience of your practice.

Typically, HIPAA compliant patient engagement systems integrate easily with all existing practice management software and have a fast return-on-investment.

Surveys Show Patients Appreciate Patient Engagement Technology

Healthcare providers have been slow to adopt communication technology, but according to an Accenture Survey, 60% of patients prefer to use technology for patient-provider communication. This is in part because the Covid crisis altered patient behaviors and expectations of technology usage in healthcare practices. Patients appreciated the more personalized interactions and faster response times that patient engagement technology brings.

Benefits Of Patient EngagementHighlighting the need to prioritize new patient acquisition and loyalty, an Actium survey** says 61% of patients want better patient engagement. 44% of respondents said they don’t regularly see their doctor and 30% said they don’t have a usual source of care, leaving the door open for organizations to register new patients.  The consumers interviewed also said that stronger patient engagement will help them go to clinics for preventive screenings and wellness checks.

Better Patient Experiences

By offering a better patient experience healthcare providers will bring patients into their clinics and keep them coming back. Adding patient engagement to practice management systems enables a clinic to connect with patients in a way that not only engages, but activates, them and makes the patient experience frictionless.

HIPAA compliant patient engagement can be easily added to any existing practice management system to enhance patient communication.

Benefits Of Patient Engagement To Healthcare Providers

  • Benefits Of Patient Engagement To Healthcare ProvidersReduce No Shows – Up to a 90% improvement in missed appointments.
  • Maximize Revenue – Patient engagement systems automatically fill empty schedule slots and encouraging annual wellness visits generates downstream revenue.
  • Improved Productivity & Focus On Patients – Streamlining and automating 24 x 7 communication reduces the burden on front desk, eliminates errors, and enable staff to spend more time on patient care.
  • More Patients – Healthcare providers who offer 24 x 7 interaction with the practice attract more patients. Recent studies show that younger patients in particular actively seek out and are willing to switch to healthcare providers that offer better digital interaction.
  • Patient Loyalty – Better communication fosters patient loyalty and trust. The added option of post-appointment surveys allow clinics to adapt to individual patients’ needs.
  • Works With Existing Practice Management Systems – A patient engagement solution integrates with all existing practice management systems meaning it is simple and fast to add.

Benefits Of Patient Engagement To Patients

Patient Engagement SystemsAnother Actium survey* highlighted two of the top reasons that patients don’t utilize preventive care as “Making appointments is too much of a hassle” and “I simply forget to make them”. They say 61% consumers surveyed report that they would like to hear more from their doctor.

Implementing a patient engagement system can have many benefits for patients, including:

  • Convenience – 24 x 7 self-scheduling is far more convenient for patients who don’t want to call the clinic when they are busy with work or personal business.
  • Self-Care – Automation encourages patients to set appointments and keep their healthcare on track.
  • Digital Registration & Forms – patients can fill out forms at their convenience before visits.

Features Of Patient Engagement Technology

Automated Appointment Notifications

  • Automatically sends reminders to patients as you or they book in appointments to reduce no-show rates.
  • Create a series of two-way customized automatic notifications to confirm and remind patients of upcoming appointments.
  • Works seamlessly with existing scheduling software and spreadsheets.
  • Integrates with EHRs and EMRs.
  • HIPAA compliant and encrypted.

Patient Self-Scheduling

  • Patients can book their own appointments 24 x 365.
  • Include ‘Schedule Now’ or ‘Request an Appointment’ links in specified notifications and reminders and on your website, social media pages and email newsletters.
  • The clinic has full control over when patients can book appointments and how long they need for each appointment type.

Waitlist Management

  • Detects cancellations in schedules and automatically fills these vacant spots with people on the waiting list.

Continuing-Care Notifications

  • Notifies patients when they are due continuing-care appointments using your scheduling and delivery preferences.

Patient Reactivation

  • Identifies patients who are overdue for appointments by monitoring visit history and recall schedules.
  • Automatically notifies them to set appointments and keep their healthcare on track.
  • Sends reminders to schedule overdue appointments.
  • Extra reminders demonstrate to patients you care about them and value their patronage. These reminders can have a significant impact on overall retention rates.

Auto Rescheduling

  • Automate the time-consuming task of rescheduling patients after appointment cancellations and no-shows. The auto-rescheduling feature detects these events and automatically contacts patients to get them rescheduled without relying on staff’ intervention.

Fill My Schedule Now

  • Maximize revenue by filling empty slots in your schedule. Fill My Schedule Now only contacts patients that match the exact parameters set by the clinic, and those patients can then easily self-book their own appointments.

Digital Registration Forms

  • Digital registration enables you to email or text patients a link to a registration form they can fill out at their convenience before visits.

Find Out More

Find out more about the Benefits Of Patient EngagementFind out more about the benefits of patient engagement solutions by filling in a form on this page. You will be contacted by a member of staff from Rectangle Health our page sponsor.

You can ask questions, request a demonstration, or arrange a no risk evaluation, all with no obligation.

Since 1983 Rectangle Health has been providing technology solutions exclusively for healthcare organizations. Their fully HIPAA compliant solutions are used by over 60,000 healthcare providers in the U.S and they process over $6 billion of patient payments annually.


 

The HIPAA Journal has arranged a 10% reader discount on Rectangle’s list price for their patient engagement solution.

By supporting one of our sponsors, you are helping The HIPAA Journal to continue to provide our news service free of charge.

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Patient Payment Options

patient payment options

Patient financing solution helps patients afford care, regardless of their credit score. With this non-recourse financing, you can focus on the treatment, and not on chasing payments.

Patient Financing

Allowing patients to say “yes” to treatment with financing options for all

Our patient financing solution helps patients afford care, regardless of their credit score. With this non-recourse financing, you can focus on the treatment, and not on chasing payments. All of the financing details are handled by Rectangle Health’s financing partner HFD, and practices receive payment shortly after patients sign up with HFD.

Patients receive multiple payment plan offers just 30 seconds after applying, and HFD handles payments so you don’t have to.
Nearly every single patient* is approved for financing. Our approval rates are unmatched.
Applications are started, and their status is visible, right inside Practice Management Bridge®– no third-party portals here.
younger patients may be switching to providers that offer digital payment solutions. This is not uncommon. According to the recent studyproduced by PYMNTS and Rectangle Health, “35% of bridge millennials and other younger patients are willing to switch healthcare providers to find better digital healthcare management tools

 

Digital payments mean fewer billing surprises for patients and easier revenue cycle management for healthcare providers.

Payments modernization means better customer experiences for patients as well as long-term, sustainable growth for private and group practices alike.

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